BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB015C04LP1|AL426812
(1064 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1555 0.0
3x_Contig1035 316 5e-86
>3x_Contig1783
Length = 22123
Score = 1555 bits (782), Expect = 0.0
Identities = 800/807 (99%), Gaps = 1/807 (0%)
Strand = Plus / Plus
Query: 5 agatcctatacgaaagatacagaactgaagccttgtccggtgagatgccaactgtaggaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21310 agatcctatacgaaagatacagaactgaagccttgtccggtgagatgccaactgtaggaa 21369
Query: 65 ctacgactcataacagagctttcagcaccacgaacaacgaatacctaggatcacccgctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21370 ctacgactcataacagagctttcagcaccacgaacaacgaatacctaggatcacccgctg 21429
Query: 125 tatctggtagagaatctgtgaggggcaatggattaccatctgcgttggggaacaatgatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21430 tatctggtagagaatctgtgaggggcaatggattaccatctgcgttggggaacaatgatt 21489
Query: 185 cgacttctttacattctaacaacgcgtcatcgaaccaggacacttacttggcaagagaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21490 cgacttctttacattctaacaacgcgtcatcgaaccaggacacttacttggcaagagaag 21549
Query: 245 aacaaatcaagctagaagaagaaagattaagggttttcgaagaaagagtgcaacaagaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21550 aacaaatcaagctagaagaagaaagattaagggttttcgaagaaagagtgcaacaagaat 21609
Query: 305 tgcaattgaagagacaggaattgctgccaagagagccagaattaagagaaatcgaagaga 364
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 21610 tgcaattgaagagacaggaattgctgcaaagagagcaagaattaagagaaatcgaagaga 21669
Query: 365 ggctagaaaaggaagcccaattgaaacaggaaggaatcaaattggaacaataagttgttg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21670 ggctagaaaaggaagcccaattgaaacaggaaggaatcaaattggaacaataagttgttg 21729
Query: 425 tcccttcctgcacactaaatagaactacatatttcgtttctttctttaacctatacctca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21730 tcccttcctgcacactaaatagaactacatatttcgtttctttctttaacctatacctca 21789
Query: 485 gttattaccataagatagataaagcattacgaaccatttcaggctactggctgctagtcg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21790 gttattaccataagatagataaagcattacgaaccatttcaggctactggctgctagtcg 21849
Query: 545 tgtgctacactttatcgatgccctaacgatcaagcaaaacctcattcatttaagawaaaw 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 21850 tgtgctacactttatcgatgccctaacgatcaagcaaaacctcattcatttaagaaaaaa 21909
Query: 605 attcccgaacgaaaaccatataanagccacttacttcgaggccgaaaatwagacgaaaaa 664
||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 21910 attcccgaacgaaaaccatataaaagccacttacttcgaggccgaaaataagacgaaaaa 21969
Query: 665 gacggtagaaggatggcttctgagcaccaaatgggtagtaccaggggta-cagggatacc 723
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 21970 gacggtagaaggatggcttctgagcaccaaatgggtagtaccaggggtaccagggatacc 22029
Query: 724 aggtgtaccatgacctagtaaatctcctttacattatctcacacagcatgccaggaggcg 783
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22030 aggtgtaccatgacctagtaaatctcctttacattatctcacacagcatgccaggaggcg 22089
Query: 784 tgtgccgtgttctgacaagaaaacatc 810
|||||||||||||||||||||||||||
Sbjct: 22090 tgtgccgtgttctgacaagaaaacatc 22116
>3x_Contig1035
Length = 4175
Score = 316 bits (159), Expect = 5e-86
Identities = 187/191 (97%), Gaps = 4/191 (2%)
Strand = Plus / Minus
Query: 789 cgtgttct-gacaagaaaacatcatgtatgaagatgtgggatggaaaagcttttagatga 847
|||||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 4163 cgtgttctagacaagaaaacatcatgtatga-gatgtgggatggaaa-gcttttagatga 4106
Query: 848 tgagtaaccagatagggacaacagatattcgtttaagtgacgaggaaagtcttttaattg 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4105 tgagtaaccagatagggacaacagatattcgtttaagtgacgaggaaagtcttttaattg 4046
Query: 908 cccagtttttagtagagcttgggcgcactctgattttagtt-cacaacttatacatgatt 966
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 4045 cccagtttttagtagagcttgggcgcactctgattttagttccacaacttatacatgatt 3986
Query: 967 tagtgtcagaa 977
|||||||||||
Sbjct: 3985 tagtgtcagaa 3975
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6860
Number of Sequences: 1807
Number of extensions: 6860
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 2
length of query: 1064
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1048
effective length of database: 10,329,639
effective search space: 10825461672
effective search space used: 10825461672
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)